Methanobrevibacter
| Methanobrevibacter | |
|---|---|
Scientific classification 
| |
| Domain: | Archaea |
| Kingdom: | Methanobacteriati |
| Phylum: | Methanobacteriota |
| Class: | Methanobacteria |
| Order: | Methanobacteriales |
| Family: | Methanobacteriaceae |
| Genus: | Methanobrevibacter Balch and Wolfe 1981 |
| Type species | |
| Methanobrevibacter ruminantium (Smith & Hungate 1958) Balch & Wolfe 1981
| |
| Species | |
Methanobrevibacter is a genus of archaeans in the family Methanobacteriaceae.[1] The species within Methanobrevibacter are strictly anaerobic archaea that produce methane, for the most part through the reduction of carbon dioxide via hydrogen. Most species live in the intestines of larger organisms, such as termites and are responsible for the large quantities of greenhouse gases that they produce.
Nomenclature
[edit]The name Methanobrevibacter has Latin and Greek roots. Methanum is Latin for methane, brevi is Latin for short, and bacter is Greek for bar or rod.[2] This word typically describes these bacteria which are short, rod shaped and produce methane.
Professional publications use the abbreviations M., Mbb., and Mbr., as in M. smithii,[3] Mbb. smithii,[4] and Mbr. smithii.[5]
Phylogeny
[edit]The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[6] and National Center for Biotechnology Information (NCBI).[1]
| 16S rRNA based LTP_06_2022[7][8][9] | 53 marker proteins based GTDB 10-RS226[10][11][12] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Unassigned species:
- "Ca. M. cononymphae" Kaneko et al. 2024
- "Ca. M. intestini" Weinberger et al. 2025
- "M. massiliense" Huynh et al. 2015
See also
[edit]References
[edit]- ^ a b C.L. Schoch; et al. "Methanobrevibacter". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28.
- ^ David R. Boone; Richard W. Castenholz, eds. (2012-01-13). Bergey's Manual of Systematic Bacteriology. Vol. 1 (2 ed.). Nueva York: Springer Science and Business Media. p. 218. doi:10.1007/978-0-387-21609-6. ISBN 978-1-4419-3159-7. S2CID 41426624. Retrieved 2016-07-24.
- ^ R. Mathur; M. Amachai; K.S. Chua; J. Mirocha; G.M. Barlow; M. Pimentel (2013-03-23). "Methane and hydrogen positivity on breath test is associated with greater body mass index and body fat". Journal of Clinical Endocrinology and Metabolism. 98 (4): E698 – E702. doi:10.1210/jc.2012-3144. PMC 3615195. PMID 23533244.
- ^ L.C. Skillman; P.N. Evans; C. Strömpl; K.N. Joblin (2006-03-04). "16S rDNA directed PCR primers and detection of methanogens in the bovine rumen". Lett Appl Microbiol. 42 (3): 222–228. doi:10.1111/j.1472-765X.2005.01833.x. PMID 16478508. S2CID 25989690.
- ^ Abhijit S. Dighe; Kamlesh Jangid; José M González; Vyankatesh J. Pidiyar; Milind S Patole; Dilip R. Ranade; Yogesh S. Shouche (2004-05-20). "Comparison of 16S rRNA gene sequences of genus Methanobrevibacter". BMC Microbiol. 4: 20. doi:10.1186/1471-2180-4-20. PMC 415545. PMID 15128464.
- ^ Methanobrevibacter in LPSN; Meier-Kolthoff, Jan P.; Sardà Carbasse, Joaquim; Peinado-Olarte, Rosa L.; Göker, Markus (7 January 2022). "TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes". Nucleic Acids Research. 50 (D1): D801 – D807. doi:10.1093/nar/gkab902.
- ^ "The LTP". Retrieved 10 May 2023.
- ^ "LTP_all tree in newick format". Retrieved 10 May 2023.
- ^ "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
- ^ "GTDB release 10-RS226". Genome Taxonomy Database. Retrieved 1 May 2025.
- ^ "ar53_r226.sp_label". Genome Taxonomy Database. Retrieved 1 May 2025.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 1 May 2025.
Further reading
[edit]Scientific journals
[edit]- Balch WE; Fox GE; Magrum LJ; Woses CR; et al. (1979). "Methanogens: reevaluation of a unique biological group". Microbiol. Rev. 43 (2): 260–296. doi:10.1128/MMBR.43.2.260-296.1979. PMC 281474. PMID 390357.
Dighe, Abhigit S; Jangid, Kamlesh; Gonzalez, Jose M; Pidiyar, Vyankatesh J; Patole, Milind S; Ranade, Dilip R; Shouche, Yogesh S (May 5, 2004). "Comparison of 16S rRNA gene sequences of genus Methanobrevibacter". BMC Microbiology. 4 (1): 20. doi:10.1186/1471-2180-4-20. PMC 415545. PMID 15128464.
- Li, Zhi Peng; Liu, Han Lu; Jin, Chun Ai; Cui, Xue Zhe; Jing, Yi; Yang, Fu He; Li, Guang Yu (2013). "Differences in the Methanogen Population Exist in Sika Deer (Cervus nippon) Fed Different Diets in China". Microbial Ecology. 66 (4): 879–888. Bibcode:2013MicEc..66..879L. doi:10.1007/s00248-013-0282-4. PMID 24061342. S2CID 7321916.
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